Title: C(S)
Browse item: https://iochem-bd.bsc.es:443/browse/handle/100/479858
Program: Orca 6.0.1 - RELEASE
Author: Kiriakidi, Sofia
Formula: C68H57N2O3P2Pd
Calculation type: Single point Minimum
Method: DFT ( r2SCAN )

JOB |

Atomic coordinates [Å]

Atom x y z BASIS SET
TYPE (Primitive) / [Contracted]

MOLECULAR INFO

Multiplicity 2
Charge 0

Bond distances

Atom1 Atom2 Distance
C1 C2 1.409018
C1 C6 1.397138
C1 H89 1.094825
C2 P7 1.853981
C2 C3 1.417912
C3 C4 1.405211
C3 C14 1.502947
C4 C5 1.393911
C4 H92 1.095360
C5 H91 1.096040
C5 C6 1.398253
C6 H90 1.096249
P7 C35 1.840711
P7 Pd16 2.351552
P7 C8 1.847684
C8 C13 1.403923
C8 C9 1.409156
C9 H98 1.096501
C9 C10 1.397219
C10 C11 1.401130
C10 H99 1.096285
C11 C12 1.397892
C11 H100 1.096233
C12 H101 1.095877
C12 C13 1.400316
C13 H102 1.094976
C14 N70 1.358571
C14 O15 1.233583
Pd16 C25 2.263920
Pd16 C24 2.200282
Pd16 P17 2.350323
Pd16 C26 2.272534
P17 C41 1.853333
P17 C18 1.840150
P17 C49 1.850177
C18 C19 1.404309
C18 C23 1.407758
C19 H108 1.095653
C19 C20 1.399412
C20 H109 1.096536
C20 C21 1.398466
C21 C22 1.401361
C21 H110 1.096530
C22 H111 1.096084
C22 C23 1.396154
C23 H112 1.096735
C24 H94 1.100725
C24 C25 1.409032
C24 C26 1.407011
C25 H95 1.097419
C25 H93 1.097561
C26 H97 1.098588
C26 H96 1.096403
C27 H122 1.098723
C27 C30 1.393317
C27 C28 1.460882
C28 O29 1.252950
C28 C34 1.480037
C30 H121 1.100718
C30 C31 1.401997
C31 H120 1.097800
C31 C32 1.409716
C32 H119 1.099036
C32 C33 1.398501
C33 C34 1.417235
C33 H118 1.099119
C34 C123 1.479692
C35 C36 1.405755
C35 C40 1.409688
C36 H103 1.095337
C36 C37 1.400968
C37 C38 1.398461
C37 H104 1.096372
C38 H105 1.096292
C38 C39 1.401673
C39 H106 1.096461
C39 C40 1.396528
C40 H107 1.096702
C41 C46 1.408122
C41 C42 1.414863
C42 C43 1.408401
C42 C47 1.512370
C43 C44 1.394306
C43 H88 1.095919
C44 H87 1.096038
C44 C45 1.398249
C45 C46 1.396151
C45 H86 1.096053
C46 H85 1.094301
C47 N55 1.354825
C47 O48 1.234089
C49 C50 1.405704
C49 C54 1.409509
C50 C51 1.399681
C50 H117 1.095035
C51 H116 1.096292
C51 C52 1.398577
C52 H115 1.096401
C52 C53 1.400581
C53 C54 1.398029
C53 H114 1.096367
C54 H113 1.095744
N55 H83 1.023736
N55 C56 1.466053
C56 C57 1.543321
C56 C64 1.522265
C56 H72 1.104284
C57 C58 1.518293
C57 H71 1.103862
C57 N70 1.464012
C58 C63 1.405375
C58 C59 1.403852
C59 H78 1.095570
C59 C60 1.399653
C60 H79 1.096809
C60 C61 1.399249
C61 H80 1.096478
C61 C62 1.400425
C62 H81 1.096501
C62 C63 1.398268
C63 H82 1.097458
C64 C69 1.404345
C64 C65 1.401621
C65 H77 1.096765
C65 C66 1.398890
C66 H76 1.096948
C66 C67 1.400308
C67 C68 1.400718
C67 H75 1.096629
C68 H74 1.096707
C68 C69 1.399517
C69 H73 1.097851
N70 H84 1.020157
C123 C125 1.418920
C123 C124 1.419810
C124 C126 1.398009
C124 H127 1.091292
C125 C128 1.397269
C125 H129 1.096428
C126 H131 1.098140
C126 C130 1.401953
C128 H132 1.097503
C128 C130 1.400896
C130 H133 1.096732

Solvation input

CPCM Dielectric -0.06191069860135Eh

Parameters:

Epsilon 7.5650
Refrac 1.4050
Epsilon function type CPCM

Radii (Å):

C 2.0400
P 2.1600
O 1.8240
Pd 1.9560
N 1.8600
H 1.3200

Total SCF energy

Value Units
Total Energy -3767.23542855723099 Eh
Nuclear Repulsion 14571.90166965746721 Eh
Electronic Energy -18339.07518751609678 Eh
One Electron Energy -34239.76115159678011 Eh
Two Electron Energy 15900.68596408068333 Eh
Potential Energy -7420.92993135862162 Eh
Kinetic Energy 3653.69450280139017 Eh
Virial Ratio 2.03107564840705

IR spectrum / Vibrational frequencies

Selected frequency :

Population analysis

Loewdin

Mulliken atomic charges

Electrostatic moments

Charge

0

Dipole moment SCF

NUC ELEC TOTAL
x -65.134098658 72.299124516 7.165025858
y 46.628375354 -43.894908032 2.733467322
z 43.412752616 -38.847536167 4.565216449
μ [Debye] 22.684837341

Frontier orbitals

Spin UP orbitals

All Homo/Lumo range:

Spin DOWN orbitals

All Homo/Lumo range:

Final results

Total Energy -3767.23542856 Eh
Final Single Point Energy -3767.23542856 Eh
CPCM Dielectric -0.0619107 Eh
Nuclear Repulsion 14571.90166966 Eh
Zero point vibrational energy 1.05907184 Eh
<S^2> 0.764 (expected value: 0.75)
Total enthalpy -3766.10748042 Eh
Electronic entropy 0.00065446 Eh
Vibrational entropy 0.11713003 Eh
Rotational entropy 0.01933958 Eh
Translational entropy 0.02229101 Eh
Final entropy 0.15941509 Eh
Final Gibbs free energy -3766.26689551 Eh

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