Title: D(R)
Browse item: https://iochem-bd.bsc.es:443/browse/handle/100/479864
Program: Orca 6.0.1 - RELEASE
Author: Kiriakidi, Sofia
Formula: C68H57N2O3P2Pd
Calculation type: Single point Minimum
Method: DFT ( r2SCAN )

JOB |

Atomic coordinates [Å]

Atom x y z BASIS SET
TYPE (Primitive) / [Contracted]

MOLECULAR INFO

Multiplicity 2
Charge 0

Bond distances

Atom1 Atom2 Distance
C1 C6 1.398501
C1 H95 1.095464
C1 C2 1.407644
C2 P7 1.860728
C2 C3 1.418914
C3 C4 1.405109
C3 C14 1.505654
C4 H98 1.095352
C4 C5 1.395462
C5 C6 1.397759
C5 H97 1.096150
C6 H96 1.096410
P7 C41 1.845634
P7 Pd16 2.264954
P7 C8 1.847699
C8 C9 1.406896
C8 C13 1.407165
C9 H104 1.096844
C9 C10 1.401513
C10 H105 1.096646
C10 C11 1.399021
C11 H106 1.096570
C11 C12 1.401545
C12 H107 1.095543
C12 C13 1.397627
C13 H108 1.097424
C14 O15 1.235975
C14 N76 1.358297
Pd16 P17 2.274918
P17 C47 1.855220
P17 C18 1.847411
P17 C55 1.849866
C18 C23 1.408964
C18 C19 1.403711
C19 C20 1.401558
C19 H114 1.095635
C20 H115 1.096786
C20 C21 1.398081
C21 H116 1.096614
C21 C22 1.402289
C22 H117 1.096598
C22 C23 1.396078
C23 H118 1.097773
C24 C26 1.501593
C24 H100 1.101396
C24 C25 1.341508
C25 H101 1.099721
C25 H99 1.098962
C26 C27 1.565129
C26 H102 1.120441
C26 H103 1.100719
C27 C28 1.560496
C27 C36 1.512168
C27 C30 1.530462
C28 O29 1.228981
C28 C40 1.462151
C30 C31 1.404729
C30 C35 1.406590
C31 C32 1.401528
C31 H133 1.098105
C32 C33 1.398058
C32 H132 1.096658
C33 C34 1.400337
C33 H131 1.096638
C34 H130 1.096787
C34 C35 1.397736
C35 H129 1.097293
C36 C37 1.374531
C36 H128 1.097232
C37 H127 1.098782
C37 C38 1.419149
C38 C39 1.410508
C38 H126 1.097121
C39 H125 1.098453
C39 C40 1.385166
C40 H124 1.098393
C41 C46 1.408034
C41 C42 1.405228
C42 H109 1.096132
C42 C43 1.400942
C43 C44 1.399469
C43 H110 1.096649
C44 C45 1.401650
C44 H111 1.096554
C45 C46 1.397795
C45 H112 1.096614
C46 H113 1.098867
C47 C52 1.409023
C47 C48 1.413682
C48 C49 1.409556
C48 C53 1.512478
C49 C50 1.393971
C49 H94 1.096047
C50 H93 1.096246
C50 C51 1.399813
C51 C52 1.395412
C51 H92 1.096287
C52 H91 1.095335
C53 N61 1.356376
C53 O54 1.233383
C55 C60 1.407632
C55 C56 1.406266
C56 H123 1.096687
C56 C57 1.399080
C57 C58 1.400134
C57 H122 1.096662
C58 C59 1.400405
C58 H121 1.096599
C59 C60 1.399546
C59 H120 1.096657
C60 H119 1.096368
N61 H89 1.025197
N61 C62 1.461744
C62 C63 1.555258
C62 H78 1.106547
C62 C70 1.522473
C63 C64 1.515869
C63 N76 1.460211
C63 H77 1.104698
C64 C69 1.402706
C64 C65 1.404921
C65 H84 1.098730
C65 C66 1.398961
C66 C67 1.400237
C66 H85 1.096483
C67 C68 1.399840
C67 H86 1.096509
C68 H87 1.096518
C68 C69 1.399445
C69 H88 1.096981
C70 C75 1.403353
C70 C71 1.402148
C71 H83 1.096858
C71 C72 1.398812
C72 C73 1.400660
C72 H82 1.096752
C73 C74 1.400250
C73 H81 1.096593
C74 C75 1.399812
C74 H80 1.096769
C75 H79 1.097527
N76 H90 1.020326

Solvation input

CPCM Dielectric -0.04291379700695Eh

Parameters:

Epsilon 7.5650
Refrac 1.4050
Epsilon function type CPCM

Radii (Å):

C 2.0400
P 2.1600
O 1.8240
Pd 1.9560
N 1.8600
H 1.3200

Total SCF energy

Value Units
Total Energy -3767.23569519880039 Eh
Nuclear Repulsion 14582.96459492438225 Eh
Electronic Energy -18350.15737632617675 Eh
One Electron Energy -34268.97122611773375 Eh
Two Electron Energy 15918.81384979155519 Eh
Potential Energy -7421.10280031416278 Eh
Kinetic Energy 3653.86710511536239 Eh
Virial Ratio 2.03102701516558

IR spectrum / Vibrational frequencies

Selected frequency :

Population analysis

Loewdin

Mulliken atomic charges

Electrostatic moments

Charge

0

Dipole moment SCF

NUC ELEC TOTAL
x -66.306824394 67.108370035 0.801545641
y 17.792241106 -17.777826018 0.014415088
z -0.142329423 1.396465509 1.254136086
μ [Debye] 3.783388012

Frontier orbitals

Spin UP orbitals

All Homo/Lumo range:

Spin DOWN orbitals

All Homo/Lumo range:

Final results

Total Energy -3767.2356952 Eh
Final Single Point Energy -3767.2356952 Eh
CPCM Dielectric -0.0429138 Eh
Nuclear Repulsion 14582.96459492 Eh
Zero point vibrational energy 1.05884371 Eh
<S^2> 0.81 (expected value: 0.75)
Total enthalpy -3766.10764227 Eh
Electronic entropy 0.00065446 Eh
Vibrational entropy 0.11818973 Eh
Rotational entropy 0.01932238 Eh
Translational entropy 0.02229101 Eh
Final entropy 0.16045758 Eh
Final Gibbs free energy -3766.26809985 Eh

Report data Creative Commons License
This HTML file Creative Commons License