Title: Cprime(R)
Browse item: https://iochem-bd.bsc.es:443/browse/handle/100/479869
Program: Orca 6.0.1 - RELEASE
Author: Kiriakidi, Sofia
Formula: C68H58N2O3P2Pd
Calculation type: Single point Minimum
Method: DFT ( r2SCAN )

JOB |

Atomic coordinates [Å]

Atom x y z BASIS SET
TYPE (Primitive) / [Contracted]

MOLECULAR INFO

Multiplicity 1
Charge 0

Bond distances

Atom1 Atom2 Distance
C1 H95 1.094380
C1 C6 1.396597
C1 C2 1.407303
C2 P7 1.854812
C2 C3 1.416817
C3 C14 1.501848
C3 C4 1.406863
C4 C5 1.393385
C4 H98 1.094695
C5 H97 1.096014
C5 C6 1.397022
C6 H96 1.096179
P7 C41 1.842641
P7 Pd16 2.386547
P7 C8 1.851681
C8 C9 1.408475
C8 C13 1.408564
C9 C10 1.400533
C9 H104 1.096115
C10 H105 1.096228
C10 C11 1.397452
C11 C12 1.400258
C11 H106 1.096139
C12 C13 1.396814
C12 H107 1.095749
C13 H108 1.095733
C14 N76 1.358201
C14 O15 1.236764
Pd16 C25 2.208944
Pd16 C24 2.197523
Pd16 P17 2.356258
Pd16 C26 2.247796
P17 C18 1.839369
P17 C47 1.864723
P17 C55 1.855988
C18 C19 1.403470
C18 C23 1.408517
C19 C20 1.400250
C19 H114 1.095307
C20 C21 1.397724
C20 H115 1.096415
C21 H116 1.096558
C21 C22 1.401309
C22 H117 1.095893
C22 C23 1.395592
C23 H118 1.096932
C24 H100 1.099972
C24 C25 1.412546
C24 C26 1.405304
C25 H99 1.097708
C25 H101 1.097760
C26 H103 1.099907
C26 H102 1.091242
C27 C30 1.475018
C27 C28 1.444464
C27 C36 1.435116
C28 C40 1.537666
C28 O29 1.253286
C30 C31 1.419848
C30 C35 1.419333
C31 H133 1.096415
C31 C32 1.398708
C32 C33 1.400592
C32 H132 1.097855
C33 H131 1.096783
C33 C34 1.402818
C34 H130 1.098149
C34 C35 1.397052
C35 H129 1.092799
C36 H128 1.101865
C36 C37 1.388089
C37 H127 1.100053
C37 C38 1.435097
C38 H126 1.101118
C38 C39 1.363628
C39 H125 1.099493
C39 C40 1.498793
C40 H134 1.111022
C40 H124 1.103587
C41 C42 1.407571
C41 C46 1.405239
C42 C43 1.398737
C42 H109 1.095548
C43 H110 1.096298
C43 C44 1.400362
C44 C45 1.399280
C44 H111 1.096333
C45 C46 1.398705
C45 H112 1.096443
C46 H113 1.095420
C47 C48 1.416372
C47 C52 1.410462
C48 C49 1.410102
C48 C53 1.509340
C49 C50 1.392600
C49 H94 1.095462
C50 H93 1.095990
C50 C51 1.397900
C51 C52 1.394887
C51 H92 1.095993
C52 H91 1.093764
C53 N61 1.351966
C53 O54 1.233833
C55 C60 1.409084
C55 C56 1.406630
C56 H123 1.093911
C56 C57 1.399204
C57 C58 1.398711
C57 H122 1.096162
C58 C59 1.399652
C58 H121 1.096315
C59 C60 1.398505
C59 H120 1.096314
C60 H119 1.095078
N61 H89 1.026134
N61 C62 1.459930
C62 C63 1.552217
C62 H78 1.104174
C62 C70 1.522502
C63 N76 1.464756
C63 C64 1.515691
C63 H77 1.104251
C64 C65 1.405684
C64 C69 1.402968
C65 H84 1.097715
C65 C66 1.398655
C66 C67 1.400440
C66 H85 1.095836
C67 C68 1.400033
C67 H86 1.096680
C68 H87 1.096585
C68 C69 1.399883
C69 H88 1.097091
C70 C75 1.403692
C70 C71 1.402686
C71 H83 1.096805
C71 C72 1.399344
C72 H82 1.096549
C72 C73 1.400094
C73 H81 1.096567
C73 C74 1.400363
C74 C75 1.399374
C74 H80 1.096719
C75 H79 1.097485
N76 H90 1.019987

Solvation input

CPCM Dielectric -0.05777744704489Eh

Parameters:

Epsilon 7.5650
Refrac 1.4050
Epsilon function type CPCM

Radii (Å):

C 2.0400
P 2.1600
O 1.8240
Pd 1.9560
N 1.8600
H 1.3200

Total SCF energy

Value Units
Total Energy -3767.85105293588276 Eh
Nuclear Repulsion 14685.28464678009186 Eh
Electronic Energy -18453.07792226893071 Eh
One Electron Energy -34467.45141373470688 Eh
Two Electron Energy 16014.37349146577617 Eh
Potential Energy -7422.04993738244593 Eh
Kinetic Energy 3654.19888444656272 Eh
Virial Ratio 2.03110180153934

IR spectrum / Vibrational frequencies

Selected frequency :

Population analysis

Loewdin

Mulliken atomic charges

Electrostatic moments

Charge

0

Dipole moment SCF

NUC ELEC TOTAL
x -55.227505492 63.820020346 8.592514854
y 18.214388717 -16.863505546 1.350883171
z 46.262001830 -42.434220590 3.827781240
μ [Debye] 24.154853114

Frontier orbitals

Spin UP orbitals

All Homo/Lumo range:

Spin DOWN orbitals

All Homo/Lumo range:

Final results

Total Energy -3767.85105294 Eh
Final Single Point Energy -3767.85105294 Eh
CPCM Dielectric -0.05777745 Eh
Nuclear Repulsion 14685.28464678 Eh
Zero point vibrational energy 1.07183298 Eh
<S^2> 0 (expected value: 0)
Total enthalpy -3766.71084266 Eh
Electronic entropy 0 Eh
Vibrational entropy 0.1154151 Eh
Rotational entropy 0.01932934 Eh
Translational entropy 0.02229229 Eh
Final entropy 0.15703673 Eh
Final Gibbs free energy -3766.86787939 Eh

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