Title: /Frequency FeOOH-H2O
Browse item: https://iochem-bd.bsc.es:443/browse/handle/100/501019
Program: Orca 6.1.1 - RELEASE
Author: Phung, Quan
Formula: C64H35Fe2N17O3
Calculation type: Single point
Method: DFT ( B3LYP )
Calculation type: Single point
Method: DFT ( B3LYP )
Calculation type: Geometry optimization Minimum
Method: DFT ( B3LYP )

JOB |

Atomic coordinates [Å]

Atom x y z BASIS SET
TYPE (Primitive) / [Contracted]

MOLECULAR INFO

Multiplicity 3
Charge 0

Bond distances

Atom1 Atom2 Distance
Fe1 N111 1.605775
Fe1 N31 1.942410
Fe1 N5 1.948606
Fe1 N59 1.946317
Fe1 O119 1.967506
Fe1 N87 1.948090
Fe2 N111 1.626371
Fe2 N32 1.936701
Fe2 N6 1.937157
Fe2 N88 1.937715
Fe2 N60 1.939349
C3 C25 1.463799
C3 N5 1.365995
C3 N109 1.305827
C4 N110 1.311000
C4 C26 1.456976
C4 N6 1.368848
N5 C7 1.353594
N6 C8 1.362495
C7 C9 1.464713
C7 N27 1.314481
C8 N28 1.315169
C8 C10 1.457493
C9 C11 1.381577
C9 C25 1.386932
C10 C12 1.386980
C10 C26 1.388716
C11 C15 1.390574
C11 H13 1.081821
C12 H14 1.081802
C12 C16 1.385704
C15 C19 1.395904
C15 H17 1.082624
C16 H18 1.082485
C16 C20 1.401021
C19 C21 1.390504
C19 H112 1.082629
C20 H113 1.082515
C20 C22 1.385632
C21 C25 1.381789
C21 H23 1.081856
C22 H24 1.081754
C22 C26 1.387097
N27 C29 1.322074
N28 C30 1.314947
C29 N31 1.348833
C29 C53 1.462604
C30 C54 1.456321
C30 N32 1.364535
N31 C33 1.369497
N32 C34 1.367500
C33 C35 1.461925
C33 N55 1.304379
C34 C36 1.456486
C34 N56 1.312379
C35 C37 1.384370
C35 C53 1.389370
C36 C38 1.387412
C36 C54 1.389041
C37 C41 1.388640
C37 H39 1.081993
C38 H40 1.081874
C38 C42 1.385399
C41 H43 1.082681
C41 C45 1.398045
C42 H44 1.082516
C42 C46 1.401360
C45 H47 1.082559
C45 C49 1.388550
C46 C50 1.385249
C46 H48 1.082509
C49 H51 1.081876
C49 C53 1.384201
C50 C54 1.387480
C50 H52 1.081737
N55 C57 1.328175
N56 C58 1.317369
C57 C81 1.451750
C57 N59 1.353128
C58 C82 1.453811
C58 N60 1.364458
N59 C61 1.359768
N60 C62 1.365727
C61 C63 1.452075
C61 N83 1.322544
C62 C64 1.453990
C62 N84 1.316005
C63 C65 1.389249
C63 C81 1.394736
C64 C66 1.388458
C64 C82 1.390358
C65 C69 1.384540
C65 H67 1.082165
C66 C70 1.384465
C66 H68 1.081890
C69 H71 1.082742
C69 C73 1.402454
C70 H72 1.082524
C70 C74 1.402278
C73 C77 1.384474
C73 H75 1.082712
C74 H76 1.082551
C74 C78 1.384374
C77 C81 1.389268
C77 H79 1.082071
C78 H80 1.081846
C78 C82 1.388509
N83 C85 1.308773
N84 C86 1.312686
C85 N87 1.374068
C85 C107 1.455704
C86 C108 1.454223
C86 N88 1.370188
N87 C89 1.342662
N88 C90 1.361369
C89 C91 1.458266
C89 N109 1.331582
C90 N110 1.318899
C90 C92 1.454837
C91 C107 1.392001
C91 C93 1.386406
C92 C94 1.388176
C92 C108 1.389929
C93 C97 1.386606
C93 H95 1.081997
C94 C98 1.384701
C94 H96 1.081851
C97 H99 1.082610
C97 C101 1.400042
C98 H100 1.082495
C98 C102 1.402022
C101 C103 1.386626
C101 H114 1.082745
C102 H115 1.082530
C102 C104 1.384645
C103 C107 1.386892
C103 H105 1.082043
C104 H106 1.081814
C104 C108 1.388229
O116 H121 0.986743
O116 H117 0.960268
O118 H120 0.965135
O118 O119 1.441057

Total SCF energy

Value Units
Total Energy -6140.40253960325208 Eh
Nuclear Repulsion 19398.93819652443563 Eh
Electronic Energy -25539.34066899300160 Eh
One Electron Energy -47108.60286492950399 Eh
Two Electron Energy 21569.26219593650239 Eh
Potential Energy -12249.04190773021037 Eh
Kinetic Energy 6108.63936812695829 Eh
Virial Ratio 2.00519971299043

Population analysis

Loewdin

Mulliken atomic charges

Electrostatic moments

Charge

0

Dipole moment SCF

NUC ELEC TOTAL
x 1.873021727 -2.257110024 -0.384088296
y -0.963632080 1.343960480 0.380328400
z 8.967832397 -10.587543329 -1.619710933
μ [Debye] 4.340180200

Broken symmetry magnetic coupling analysis

Field Value Units
Broken symmetry S(High-Spin) 1.0
S**2(High-Spin) 2.1203
S**2(BrokenSym) 0.7071
E(High-spin) -6140.402540 Eh
E(BrokenSym) -6140.426880 Eh
E(High-Spin)-E(BrokenSym) 5341.659 cm-1

Frontier orbitals

Spin UP orbitals

All Homo/Lumo range:

Spin DOWN orbitals

All Homo/Lumo range:

Final results

Total Energy -6140.4025396 Eh
Dispersion correction -0.45560757 Eh
Final Single Point Energy -6140.88248782 Eh
Nuclear Repulsion 19398.93819652 Eh
<S^2> 0.707 (expected value: 0)

JOB |

Atomic coordinates [Å]

Atom x y z BASIS SET
TYPE (Primitive) / [Contracted]

MOLECULAR INFO

Multiplicity 1
Charge 0

Bond distances

Atom1 Atom2 Distance
Fe1 N111 1.605775
Fe1 N31 1.942410
Fe1 N5 1.948606
Fe1 N59 1.946317
Fe1 O119 1.967506
Fe1 N87 1.948090
Fe2 N111 1.626371
Fe2 N32 1.936701
Fe2 N6 1.937157
Fe2 N88 1.937715
Fe2 N60 1.939349
C3 C25 1.463799
C3 N5 1.365995
C3 N109 1.305827
C4 N110 1.311000
C4 C26 1.456976
C4 N6 1.368848
N5 C7 1.353594
N6 C8 1.362495
C7 C9 1.464713
C7 N27 1.314481
C8 N28 1.315169
C8 C10 1.457493
C9 C11 1.381577
C9 C25 1.386932
C10 C12 1.386980
C10 C26 1.388716
C11 C15 1.390574
C11 H13 1.081821
C12 H14 1.081802
C12 C16 1.385704
C15 C19 1.395904
C15 H17 1.082624
C16 H18 1.082485
C16 C20 1.401021
C19 C21 1.390504
C19 H112 1.082629
C20 H113 1.082515
C20 C22 1.385632
C21 C25 1.381789
C21 H23 1.081856
C22 H24 1.081754
C22 C26 1.387097
N27 C29 1.322074
N28 C30 1.314947
C29 N31 1.348833
C29 C53 1.462604
C30 C54 1.456321
C30 N32 1.364535
N31 C33 1.369497
N32 C34 1.367500
C33 C35 1.461925
C33 N55 1.304379
C34 C36 1.456486
C34 N56 1.312379
C35 C37 1.384370
C35 C53 1.389370
C36 C38 1.387412
C36 C54 1.389041
C37 C41 1.388640
C37 H39 1.081993
C38 H40 1.081874
C38 C42 1.385399
C41 H43 1.082681
C41 C45 1.398045
C42 H44 1.082516
C42 C46 1.401360
C45 H47 1.082559
C45 C49 1.388550
C46 C50 1.385249
C46 H48 1.082509
C49 H51 1.081876
C49 C53 1.384201
C50 C54 1.387480
C50 H52 1.081737
N55 C57 1.328175
N56 C58 1.317369
C57 C81 1.451750
C57 N59 1.353128
C58 C82 1.453811
C58 N60 1.364458
N59 C61 1.359768
N60 C62 1.365727
C61 C63 1.452075
C61 N83 1.322544
C62 C64 1.453990
C62 N84 1.316005
C63 C65 1.389249
C63 C81 1.394736
C64 C66 1.388458
C64 C82 1.390358
C65 C69 1.384540
C65 H67 1.082165
C66 C70 1.384465
C66 H68 1.081890
C69 H71 1.082742
C69 C73 1.402454
C70 H72 1.082524
C70 C74 1.402278
C73 C77 1.384474
C73 H75 1.082712
C74 H76 1.082551
C74 C78 1.384374
C77 C81 1.389268
C77 H79 1.082071
C78 H80 1.081846
C78 C82 1.388509
N83 C85 1.308773
N84 C86 1.312686
C85 N87 1.374068
C85 C107 1.455704
C86 C108 1.454223
C86 N88 1.370188
N87 C89 1.342662
N88 C90 1.361369
C89 C91 1.458266
C89 N109 1.331582
C90 N110 1.318899
C90 C92 1.454837
C91 C107 1.392001
C91 C93 1.386406
C92 C94 1.388176
C92 C108 1.389929
C93 C97 1.386606
C93 H95 1.081997
C94 C98 1.384701
C94 H96 1.081851
C97 H99 1.082610
C97 C101 1.400042
C98 H100 1.082495
C98 C102 1.402022
C101 C103 1.386626
C101 H114 1.082745
C102 H115 1.082530
C102 C104 1.384645
C103 C107 1.386892
C103 H105 1.082043
C104 H106 1.081814
C104 C108 1.388229
O116 H121 0.986743
O116 H117 0.960268
O118 H120 0.965135
O118 O119 1.441057

Total SCF energy

Value Units
Total Energy -6140.42675218028853 Eh
Nuclear Repulsion 19398.93819652443563 Eh
Electronic Energy -25539.36497483386484 Eh
One Electron Energy -47104.60852045581851 Eh
Two Electron Energy 21565.24354562195367 Eh
Potential Energy -12248.76975029417918 Eh
Kinetic Energy 6108.34299811389064 Eh
Virial Ratio 2.00525244801680

Population analysis

Loewdin

Mulliken atomic charges

Electrostatic moments

Charge

0

Dipole moment SCF

NUC ELEC TOTAL
x 1.873021727 -2.256576510 -0.383554782
y -0.963632080 1.349058866 0.385426786
z 8.967832397 -10.587277363 -1.619444967
μ [Debye] 4.342139529

Broken symmetry magnetic coupling analysis

Field Value Units
Broken symmetry S(High-Spin) 0.0
S**2(High-Spin) 0.7070
S**2(BrokenSym) 0.7063
E(High-spin) -6140.426752 Eh
E(BrokenSym) -6140.426870 Eh
E(High-Spin)-E(BrokenSym) 25.821 cm-1

Frontier orbitals

Spin UP orbitals

All Homo/Lumo range:

Spin DOWN orbitals

All Homo/Lumo range:

Final results

Total Energy -6140.42675218 Eh
Dispersion correction -0.45560757 Eh
Final Single Point Energy -6140.88247741 Eh
Nuclear Repulsion 19398.93819652 Eh
<S^2> 0.706 (expected value: 0)

JOB |

Atomic coordinates [Å]

Atom x y z BASIS SET
TYPE (Primitive) / [Contracted]

MOLECULAR INFO

Multiplicity 1
Charge 0

Bond distances

Atom1 Atom2 Distance
Fe1 N111 1.668366
Fe1 N87 1.973883
Fe1 O119 1.903500
Fe1 N59 1.970723
Fe1 N5 1.973165
Fe1 N31 1.966505
Fe2 N60 1.958217
Fe2 N32 1.955035
Fe2 N111 1.594476
Fe2 N6 1.958456
Fe2 N88 1.956289
C3 C25 1.461247
C3 N5 1.369890
C3 N109 1.316899
C4 C26 1.455563
C4 N110 1.315139
C4 N6 1.379140
N5 C7 1.369934
N6 C8 1.379091
C7 C9 1.460682
C7 N27 1.316121
C8 N28 1.315164
C8 C10 1.455621
C9 C11 1.394216
C9 C25 1.407295
C10 C12 1.396759
C10 C26 1.407753
C11 C15 1.397985
C11 H13 1.090810
C12 H14 1.090670
C12 C16 1.396064
C15 C19 1.408829
C15 H17 1.093035
C16 H18 1.092843
C16 C20 1.410844
C19 C21 1.397948
C19 H112 1.093025
C20 H113 1.092834
C20 C22 1.396059
C21 C25 1.394606
C21 H23 1.090879
C22 H24 1.090683
C22 C26 1.396742
N27 C29 1.319803
N28 C30 1.314969
C29 N31 1.366841
C29 C53 1.460896
C30 C54 1.455194
C30 N32 1.380241
N31 C33 1.372374
N32 C34 1.380204
C33 C35 1.460235
C33 N55 1.316224
C34 C36 1.455146
C34 N56 1.314907
C35 C37 1.395813
C35 C53 1.409006
C36 C38 1.396914
C36 C54 1.407612
C37 C41 1.397348
C37 H39 1.090961
C38 H40 1.090683
C38 C42 1.395886
C41 H43 1.093043
C41 C45 1.409691
C42 H44 1.092833
C42 C46 1.411027
C45 H47 1.093007
C45 C49 1.397329
C46 C50 1.395883
C46 H48 1.092844
C49 C53 1.395656
C49 H51 1.090917
C50 C54 1.396912
C50 H52 1.090676
N55 C57 1.319774
N56 C58 1.315063
C57 C81 1.457979
C57 N59 1.371457
C58 N60 1.379238
C58 C82 1.455587
N59 C61 1.371572
N60 C62 1.379250
C61 C63 1.458316
C61 N83 1.320056
C62 C64 1.455536
C62 N84 1.314968
C63 C65 1.397182
C63 C81 1.410886
C64 C66 1.396648
C64 C82 1.407659
C65 C69 1.396163
C65 H67 1.090967
C66 C70 1.396084
C66 H68 1.090648
C69 C73 1.410955
C69 H71 1.093029
C70 H72 1.092811
C70 C74 1.410760
C73 H75 1.093019
C73 C77 1.396109
C74 H76 1.092830
C74 C78 1.396106
C77 C81 1.397196
C77 H79 1.090955
C78 H80 1.090669
C78 C82 1.396677
N83 C85 1.317165
N84 C86 1.314768
C85 C107 1.459987
C85 N87 1.372864
C86 C108 1.455232
C86 N88 1.380260
N87 C89 1.367543
N88 C90 1.380184
C89 C91 1.460146
C89 N109 1.320383
C90 C92 1.455261
C90 N110 1.314902
C91 C93 1.395978
C91 C107 1.409355
C92 C94 1.396846
C92 C108 1.407569
C93 C97 1.397048
C93 H95 1.090916
C94 H96 1.090677
C94 C98 1.395938
C97 C101 1.409965
C97 H99 1.092998
C98 H100 1.092828
C98 C102 1.410931
C101 H114 1.093038
C101 C103 1.397100
C102 H115 1.092808
C102 C104 1.395929
C103 C107 1.396111
C103 H105 1.090976
C104 H106 1.090654
C104 C108 1.396822
O116 H121 0.977423
O116 H117 0.961573
O118 H120 0.968069
O118 O119 1.434080

Total SCF energy

Value Units
Total Energy -6140.42684885585004 Eh
Nuclear Repulsion 19398.93819652443563 Eh
Electronic Energy -25539.36497460738610 Eh
One Electron Energy -47104.59549805313873 Eh
Two Electron Energy 21565.23052344575262 Eh
Potential Energy -12248.76376149688986 Eh
Kinetic Energy 6108.33691264103982 Eh
Virial Ratio 2.00525346533332

IR spectrum / Vibrational frequencies

Selected frequency :

Population analysis

Loewdin

Mulliken atomic charges

Electrostatic moments

Charge

0

Dipole moment SCF

NUC ELEC TOTAL
x 2.069238758 -2.505840963 -0.436602204
y -0.421144379 0.984571528 0.563427149
z 8.159137230 -10.133848348 -1.974711119
μ [Debye] 5.336296292

Frontier orbitals

Spin UP orbitals

All Homo/Lumo range:

Spin DOWN orbitals

All Homo/Lumo range:

Final results

Total Energy -6140.42684886 Eh
Dispersion correction -0.45756327 Eh
Final Single Point Energy -6140.9006712 Eh
Nuclear Repulsion 19398.93819652 Eh
Zero point vibrational energy 0.8816971 Eh
<S^2> 0.818 (expected value: 0)
Total enthalpy -6139.95556355 Eh
Electronic entropy 0 Eh
Vibrational entropy 0.10459892 Eh
Rotational entropy 0.01933319 Eh
Translational entropy 0.02239267 Eh
Final entropy 0.14632478 Eh
Final Gibbs free energy -6140.10188833 Eh

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